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25.6.0 (LabID S3)

This release mainly brings the new ability to share dataset copies on S3 Storage.

New Features

  • [Server & UI] Datasets can now be copied to S3 Storage volumes (from dataset list, project, and study pages), allowing for dataset sharing and collaboration.
  • [CLI] New CLI command labid export study expose a new format for bioimage archive to avoid repeating one channel per row
  • [UI] Add a JSON viewer field component
  • [Documentation] Added documentation for S3 features and configuration

Enhancements

  • [Server] Improved installation procedure and documentation
  • [Server] Orders now visible in OrderItems Detail page
  • [Server] AdminUI: Task result list page now loads much faster
  • [Server] Study export is missing imaging assay XYZT columns in exported csv column
  • [Server] Admin: add permission widget on StorageVolumes
  • [Server] API to allow fetching assay by study
  • [Server] View permissions to cascade to protocols
  • [Server] Data removal email improved
  • [CLI] AVITI sniffer to properly support sample regex
  • [UI] Add visual cues to user about dataset info: managed dataset, status and QC
  • [UI] Improve JSON field (specifically in list view)
  • [UI] Improved token handling and refresh strategy to reduce query volume

Fixes

  • [Server] Filter sample by children/parent fixed
  • [Server] Orders now visible in OrderItems Detail page
  • [Server] get_folder_size() got an unexpected keyword argument 'recursive'
  • [Server] Bolding text does not work as expected when exporting an experiment as PDF
  • [Server] Items can be deleted multiple times and the latest deletion data overwrites the first
  • [Server] Sync assay type is resetting field orders (also happening for samples)
  • [Server] Some datafiles with Filetype "folder" have the flag "is directory" false
  • [UI] fix datafiles from not modifyable volume be sent to deletion
  • [UI] prevent name and description edition when editing a frozen experiment fix
  • [UI] fix reload button in "lab note has been modified" notification.
  • [UI] disable freeze button when experiment is ongoing
  • [UI] fix deriving samples from one type to another, also remove parent specimen on samples derived from a sample with a parent specimen
  • [UI] Replace query parameter query with query_expression in different filters
  • [UI] Disable batch edit for sample and assays on combined types list pages
  • [UI] Annotation list: Do no hide pop up from fields with overflow hidden...